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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
332
ChIP-seq
Assay category
332
DNA binding
Target of assay
264
histone
264
histone modification
149
narrow histone mark
115
broad histone mark
64
control
4
transcription factor
Date released
90
May, 2021
60
November, 2017
50
May, 2020
49
October, 2019
48
August, 2017
24
August, 2021
11
October, 2017
Available data
1113
bam
979
bigWig
933
bed narrowPeak
448
bigBed narrowPeak
437
fastq
378
tagAlign
bed broadPeak
53
bed bed3+
21
bigBed broadPeak
1
tagAlign bed3+
Organism
331
Homo sapiens
Biosample type
203
tissue
89
primary cell
40
in vitro differentiated cells
cell line
Organ
109
brain
74
liver
21
connective tissue
7
adipose tissue
7
epithelium
7
pancreas
2
musculature of body
1
pituitary gland
Project
248
AMP
84
T1D
Genome assembly (visualization)
207
GRCh38
175
hg19
Lab
248
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
3
inconsistent ontology term
Audit category:
2
missing controlled_by
biosample_type!
cell line
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
332 results
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Clear Filters
ChIP-seq
tissue
liver
70
layer of hippocampus
15
substantia nigra
15
caudate nucleus
14
cingulate gyrus
12
+ See 43 more…
primary cell
monocyte
84
hepatocyte
4
skeletal muscle myoblast
1
in vitro differentiated cells
neural progenitor cell
20
adipocyte
14
cardiomyocytes
3
pancreatic PP cell
3
See all biosamples
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