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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
364
ChIP-seq
Assay category
364
DNA binding
Target of assay
298
histone
298
histone modification
167
narrow histone mark
131
broad histone mark
62
control
4
transcription factor
Date released
90
May, 2021
85
August, 2017
66
November, 2017
50
May, 2020
49
October, 2019
24
August, 2021
October, 2017
Available data
1105
bam
973
bigWig
927
bed narrowPeak
442
bigBed narrowPeak
428
fastq
364
tagAlign
53
bed bed3+
53
bed broadPeak
21
bigBed broadPeak
1
tagAlign bed3+
Organism
357
Homo sapiens
Biosample type
224
tissue
100
primary cell
40
in vitro differentiated cells
cell line
Organ
104
brain
74
liver
22
connective tissue
19
pancreas
15
musculature of body
8
adipose tissue
7
epithelium
1
pituitary gland
Project
280
AMP
84
T1D
Genome assembly (visualization)
226
GRCh38
215
hg19
Lab
280
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
3
inconsistent ontology term
Audit category:
2
inconsistent assembly
biosample_type!
cell line
month_released!
October, 2017
BIOSAMPLE
ASSAY
364 results
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ChIP-seq
tissue
liver
70
substantia nigra
16
caudate nucleus
15
layer of hippocampus
15
skeletal muscle tissue
15
+ See 42 more…
primary cell
monocyte
84
skeletal muscle myoblast
12
hepatocyte
4
in vitro differentiated cells
neural progenitor cell
20
adipocyte
14
cardiomyocytes
3
pancreatic PP cell
3
See all biosamples
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