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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
ChIP-seq
Assay category
96
DNA binding
49
DNA accessibility
15
Transcription
5
3D chromatin structure
3
DNA methylation
Target of assay
71
histone
71
histone modification
45
broad histone mark
26
narrow histone mark
20
control
5
RNA binding protein
5
transcription factor
Date released
50
May, 2019
40
October, 2019
6
November, 2017
Available data
96
bam
75
bigWig
71
bed narrowPeak
71
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
6
fastq
Organism
96
Homo sapiens
Biosample type
73
tissue
23
primary cell
cell line
Organ
218
brain
190
pancreas
174
liver
153
connective tissue
128
heart
114
epithelium
96
vasculature
93
blood vessel
73
adipose tissue
66
limb
kidney
39
musculature of body
35
nerve
28
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
96
AMP
Genome assembly (visualization)
75
hg19
71
GRCh38
Lab
96
AMP-T2D consortium
biosample_type!
cell line
lab.title!
Katalin Susztak, Upenn
month_released!
November, 2020
organ_slims!
kidney
BIOSAMPLE
ASSAY
96 results
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ChIP-seq
tissue
tibial artery
23
ascending aorta
16
thoracic aorta
16
aorta
13
coronary artery
5
primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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