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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
Assay category
167
Transcription
103
DNA accessibility
53
DNA methylation
33
DNA binding
7
3D chromatin structure
Target of assay
histone
81
histone modification
43
narrow histone mark
38
broad histone mark
25
control
8
transcription factor
7
RNA binding protein
1
chromatin remodeller
Date released
12
August, 2017
5
December, 2017
4
June, 2019
4
November, 2017
3
October, 2019
2
May, 2019
2
May, 2021
1
August, 2021
Available data
33
bam
21
fastq
10
bigWig
8
bed narrowPeak
7
bigBed narrowPeak
3
tagAlign
2
bed broadPeak
2
bigBed broadPeak
Organism
33
Homo sapiens
Biosample type
26
primary cell
7
in vitro differentiated cells
cell line
Organ
90
liver
75
connective tissue
58
pancreas
41
adipose tissue
33
epithelium
31
brain
31
heart
25
vasculature
23
blood vessel
17
limb
14
spleen
12
kidney
11
nerve
10
embryo
8
artery
6
musculature of body
2
eye
2
vein
Project
33
AMP
Genome assembly (visualization)
10
hg19
8
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
biosample_type!
cell line
organ_slims!
esophagus
target.investigated_as!
histone
BIOSAMPLE
ASSAY
33 results
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ChIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
epithelial cell of proximal tubule
3
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
+ See 4 more…
in vitro differentiated cells
hepatocyte
3
Hepatic endoderm
2
pancreatic PP cell
2
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