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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
Assay category
206
DNA accessibility
37
DNA binding
5
3D chromatin structure
2
Transcription
Target of assay
17
histone
17
histone modification
16
transcription factor
9
narrow histone mark
8
broad histone mark
4
control
3
RNA binding protein
Date released
26
August, 2017
3
August, 2021
3
December, 2017
3
November, 2017
2
September, 2017
Available data
1432
bam
1275
bigWig
1215
bed narrowPeak
787
bigBed narrowPeak
737
fastq
358
tagAlign
114
bed broadPeak
79
bigBed broadPeak
34
bed bed3+
3
tar
1
tagAlign bed3+
Organism
37
Homo sapiens
Biosample type
28
tissue
in vitro differentiated cells
3
cell line
3
primary cell
3
stem cell
Organ
21
pancreas
9
liver
4
adipose tissue
4
connective tissue
3
epithelium
Project
37
AMP
Genome assembly (visualization)
37
hg19
34
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
14
missing controlled_by
Audit category:
2
inconsistent control read length
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
tissue
islet of Langerhans
21
white adipose tissue
4
liver
3
cell line
HepG2
3
primary cell
hepatocyte
3
stem cell
hESC
3
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