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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
Assay category
399
Transcription
53
DNA binding
8
DNA accessibility
6
DNA methylation
Target of assay
32
histone
32
histone modification
24
control
broad histone mark
17
transcription factor
12
narrow histone mark
5
RNA binding protein
Date released
30
August, 2017
23
October, 2018
Available data
37
bam
37
fastq
19
bigWig
7
bed narrowPeak
6
bigBed narrowPeak
4
bed bed3+
4
tagAlign
1
bed broadPeak
Organism
53
Homo sapiens
Biosample type
53
tissue
Organ
507
liver
139
brain
101
connective tissue
97
pancreas
72
heart
60
blood
60
bodily fluid
53
adipose tissue
43
blood vessel
43
vasculature
32
limb
27
kidney
24
epithelium
20
artery
19
nerve
18
embryo
16
spleen
13
musculature of body
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
53
AMP
Genome assembly (visualization)
19
hg19
18
GRCh38
Lab
53
AMP-T2D consortium
Audit category:
12
missing controlled_by
biosample_type!
primary cell
lab.title!
Anna Gloyn, Oxford
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
53 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
16
subcutaneous adipose tissue
12
white adipose tissue
12
omental fat pad
11
adipose tissue
2
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