Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
392
ChIP-seq
Assay category
392
DNA binding
188
Transcription
23
DNA accessibility
5
DNA methylation
3
3D chromatin structure
1
DNA sequencing
Target of assay
289
transcription factor
control
100
histone modification
99
histone
66
recombinant protein
58
narrow histone mark
41
broad histone mark
39
RNA binding protein
18
chromatin remodeller
2
other context
2
other post-translational modification
Date released
259
November, 2017
50
December, 2017
November, 2018
37
August, 2017
27
May, 2020
14
August, 2021
5
October, 2019
Available data
368
bigWig
362
bed narrowPeak
357
bam
326
fastq
304
bigBed narrowPeak
58
bed broadPeak
58
bigBed broadPeak
55
tagAlign
3
tar
2
bed bed3+
Organism
392
Homo sapiens
Biosample type
273
cell line
105
tissue
14
in vitro differentiated cells
primary cell
Organ
392
liver
184
brain
112
pancreas
111
heart
109
connective tissue
61
blood vessel
61
vasculature
49
adipose tissue
49
limb
42
blood
42
bodily fluid
31
epithelium
28
kidney
25
artery
25
musculature of body
24
nerve
15
embryo
9
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
392
AMP
Genome assembly (visualization)
366
hg19
308
GRCh38
Lab
378
AMP-T2D consortium
14
Bing Ren, UCSD
Audit category:
27
inconsistent control
Audit category:
10
missing controlled_by
Audit category:
22
inconsistent control read length
4
inconsistent control run_type
biosample_type!
primary cell
month_released!
November, 2018
target.investigated_as!
control
BIOSAMPLE
ASSAY
392 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
273
tissue
liver
98
right lobe of liver
7
in vitro differentiated cells
hepatocyte
14
Download