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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
309
ChIP-seq
Assay category
309
DNA binding
Target of assay
244
transcription factor
66
recombinant protein
59
control
37
RNA binding protein
18
histone
18
histone modification
chromatin remodeller
10
narrow histone mark
8
broad histone mark
2
other context
2
other post-translational modification
Date released
309
November, 2017
165
May, 2021
117
August, 2017
53
November, 2018
47
October, 2019
45
December, 2017
43
August, 2021
32
September, 2018
31
June, 2019
25
December, 2018
24
February, 2018
13
November, 2019
12
January, 2019
8
February, 2021
5
May, 2019
1
March, 2020
Available data
309
fastq
308
bam
262
bigWig
240
bed narrowPeak
240
bigBed narrowPeak
60
bed broadPeak
60
bigBed broadPeak
12
tagAlign
3
tar
Organism
309
Homo sapiens
Biosample type
300
cell line
tissue
9
primary cell
Organ
300
liver
9
brain
6
epithelium
6
vasculature
3
blood vessel
Project
309
AMP
Genome assembly (visualization)
260
hg19
210
GRCh38
Lab
309
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
15
inconsistent control read length
biosample_type!
tissue
files.file_type!
xls
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
309 results
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Clear Filters
ChIP-seq
cell line
HepG2
300
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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