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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
ChIP-seq
Assay category
101
Transcription
96
DNA binding
30
DNA accessibility
2
3D chromatin structure
Target of assay
64
transcription factor
20
control
20
histone
20
histone modification
11
RNA binding protein
broad histone mark
10
chromatin remodeller
10
narrow histone mark
7
recombinant protein
Date released
27
December, 2018
19
October, 2019
18
January, 2019
15
November, 2018
8
February, 2021
7
November, 2019
1
March, 2020
1
May, 2021
Available data
96
bam
76
bed narrowPeak
76
bigWig
60
fastq
57
bigBed narrowPeak
8
tagAlign
Organism
96
Homo sapiens
Biosample type
474
tissue
154
primary cell
134
in vitro differentiated cells
96
cell line
2
stem cell
Organ
liver
60
blood
60
bodily fluid
18
pancreas
10
kidney
9
epithelium
6
artery
6
blood vessel
6
heart
6
vasculature
Project
94
AMP
2
T1D
Genome assembly (visualization)
76
GRCh38
76
hg19
Lab
96
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
1
inconsistent control
organ_slims!
liver
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
96 results
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ChIP-seq
cell line
GM12878
60
EndoC_BH1
9
Panc1
9
smooth muscle cell of the coronary artery
6
RCC 7860 HIF1a re-expression
4
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