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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ChIP-seq
Assay category
38
DNA binding
37
Transcription
21
DNA accessibility
2
3D chromatin structure
Target of assay
19
histone
19
histone modification
11
control
10
broad histone mark
9
narrow histone mark
8
transcription factor
7
recombinant protein
1
RNA binding protein
Date released
23
October, 2019
13
November, 2019
1
March, 2020
1
May, 2021
Available data
38
bam
26
bed narrowPeak
26
bigWig
6
bigBed narrowPeak
Organism
38
Homo sapiens
Biosample type
144
tissue
85
primary cell
38
cell line
3
in vitro differentiated cells
Organ
378
liver
60
blood
60
bodily fluid
28
pancreas
15
epithelium
10
kidney
6
artery
6
blood vessel
6
heart
6
vasculature
Project
36
AMP
2
T1D
Genome assembly (visualization)
26
GRCh38
26
hg19
Lab
38
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
BIOSAMPLE
ASSAY
38 results
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ChIP-seq
cell line
EndoC_BH1
15
Panc1
13
RCC 7860 HIF1a re-expression
4
RCC 7860 HIF2a over-expression
3
RCC 7860 vector
3
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