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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
Assay category
182
Transcription
180
DNA accessibility
58
DNA methylation
28
DNA binding
6
3D chromatin structure
Target of assay
25
control
7
histone
7
histone modification
broad histone mark
3
narrow histone mark
Date released
12
August, 2017
8
June, 2019
4
October, 2019
2
May, 2021
1
August, 2021
1
May, 2019
Available data
142
bam
bigWig
114
bed narrowPeak
61
fastq
49
tagAlign
36
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
2
bed bed3+
Organism
28
Homo sapiens
Biosample type
242
tissue
72
cell line
64
in vitro differentiated cells
28
primary cell
1
stem cell
Organ
20
epithelium
12
pancreas
3
blood vessel
3
connective tissue
3
kidney
3
vasculature
3
vein
2
heart
2
musculature of body
1
eye
1
liver
Project
28
AMP
Lab
28
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
files.file_type!
bigWig
month_released!
July, 2018
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
endothelial cell of umbilical vein
3
cardiac fibroblast
2
epithelial cell of proximal tubule
2
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