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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
720
ChIP-seq
Assay category
916
Transcription
720
DNA binding
242
DNA accessibility
17
DNA methylation
Target of assay
464
histone modification
463
histone
241
narrow histone mark
222
broad histone mark
167
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
172
October, 2019
115
May, 2019
79
April, 2019
75
August, 2017
74
October, 2018
69
November, 2017
50
May, 2020
48
December, 2017
10
November, 2018
8
October, 2017
7
December, 2018
7
January, 2019
6
September, 2017
March, 2020
Available data
720
bam
613
bigWig
593
bed narrowPeak
377
bigBed narrowPeak
238
tagAlign
220
fastq
35
bed broadPeak
28
bed bed3+
1
tagAlign bed3+
Organism
713
Homo sapiens
Biosample type
720
tissue
464
cell line
239
primary cell
146
in vitro differentiated cells
3
stem cell
Organ
187
brain
132
liver
95
pancreas
82
heart
73
blood vessel
73
vasculature
65
limb
37
adipose tissue
37
connective tissue
35
nerve
28
artery
27
kidney
20
spleen
7
musculature of body
1
pituitary gland
Project
720
AMP
Genome assembly (visualization)
546
GRCh38
503
hg19
Lab
720
AMP-T2D consortium
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
25
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
month_released!
March, 2020
organ_slims!
eye
BIOSAMPLE
ASSAY
720 results
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Clear Filters
ChIP-seq
tissue
liver
122
body of pancreas
35
tibial nerve
35
heart left ventricle
34
islet of Langerhans
28
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