Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
611
ChIP-seq
Assay category
611
DNA binding
390
DNA accessibility
Target of assay
523
histone modification
522
histone
268
narrow histone mark
254
broad histone mark
85
transcription factor
27
RNA binding protein
3
control
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
145
October, 2019
93
May, 2019
76
August, 2017
65
April, 2019
58
November, 2017
45
October, 2018
40
May, 2024
36
December, 2017
27
May, 2020
7
November, 2018
6
January, 2019
6
October, 2017
3
December, 2018
2
March, 2020
2
September, 2017
Available data
722
bam
615
bigWig
595
bed narrowPeak
377
bigBed narrowPeak
238
tagAlign
220
fastq
35
bed broadPeak
28
bed bed3+
1
tagAlign bed3+
0
hdf5
Organism
605
Homo sapiens
Biosample type
611
tissue
392
cell line
226
primary cell
115
in vitro differentiated cells
3
stem cell
Organ
164
brain
107
heart
90
liver
84
pancreas
57
blood vessel
57
vasculature
48
limb
24
nerve
21
artery
20
kidney
19
musculature of body
12
spleen
11
adipose tissue
11
connective tissue
1
pituitary gland
Project
609
AMP
2
T1D
Genome assembly (visualization)
580
GRCh38
519
hg19
Lab
571
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
17
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
611 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
83
left cardiac atrium
40
islet of Langerhans
31
heart left ventricle
29
body of pancreas
26
+ See 101 more…
See all biosamples
Download