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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
613
ChIP-seq
Assay category
917
Transcription
613
DNA binding
224
DNA accessibility
16
DNA methylation
Target of assay
522
histone modification
521
histone
268
narrow histone mark
253
broad histone mark
93
transcription factor
27
RNA binding protein
3
other context
3
other post-translational modification
chromatin remodeller
Date released
145
October, 2019
93
May, 2019
83
August, 2017
65
April, 2019
57
November, 2017
45
October, 2018
40
May, 2024
34
December, 2017
27
May, 2020
7
November, 2018
6
January, 2019
6
October, 2017
3
December, 2018
2
March, 2020
Available data
720
bam
613
bigWig
593
bed narrowPeak
375
bigBed narrowPeak
238
tagAlign
218
fastq
35
bed broadPeak
28
bed bed3+
1
tagAlign bed3+
Organism
607
Homo sapiens
Biosample type
613
tissue
381
cell line
246
primary cell
112
in vitro differentiated cells
2
stem cell
Organ
163
brain
107
heart
87
liver
82
pancreas
57
blood vessel
57
vasculature
48
limb
24
nerve
21
artery
20
kidney
19
adipose tissue
19
connective tissue
19
musculature of body
12
spleen
1
pituitary gland
Project
611
AMP
2
T1D
Genome assembly (visualization)
582
GRCh38
522
hg19
Lab
573
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
25
inconsistent control
2
inconsistent ontology term
Audit category:
25
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
lab.title!
Xin Sun, UCSD
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
613 results
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Clear Filters
ChIP-seq
tissue
liver
80
left cardiac atrium
40
heart left ventricle
29
islet of Langerhans
29
body of pancreas
26
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