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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
Assay category
401
Transcription
56
DNA binding
8
DNA accessibility
6
DNA methylation
Target of assay
32
histone
32
histone modification
24
control
20
broad histone mark
transcription factor
12
narrow histone mark
5
RNA binding protein
Date released
38
August, 2017
18
October, 2018
Available data
20
bam
20
fastq
8
tagAlign
2
bed narrowPeak
2
bigWig
1
bed broadPeak
1
bigBed narrowPeak
Organism
56
Homo sapiens
Biosample type
56
tissue
Organ
215
brain
214
liver
199
pancreas
120
epithelium
117
heart
113
connective tissue
93
vasculature
91
blood vessel
66
limb
56
adipose tissue
42
kidney
musculature of body
35
nerve
29
artery
19
embryo
17
vein
14
spleen
9
blood
9
bodily fluid
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
56
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
56
AMP-T2D consortium
files.file_type!
bed bed3
organ_slims!
musculature of body
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
56 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
36
subcutaneous adipose tissue
10
omental fat pad
8
adipose tissue
2
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