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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
257
ChIP-seq
Assay category
257
DNA binding
183
Transcription
114
DNA accessibility
15
DNA methylation
Target of assay
162
histone modification
161
histone
87
broad histone mark
73
narrow histone mark
50
control
45
transcription factor
6
RNA binding protein
2
chromatin remodeller
Date released
336
November, 2017
257
August, 2017
240
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
13
November, 2019
12
October, 2017
8
February, 2021
6
September, 2017
3
March, 2020
0
February, 2023
Available data
181
bam
181
fastq
171
bigWig
132
bed narrowPeak
85
tagAlign
bed broadPeak
33
bed bed3+
32
bigBed narrowPeak
13
bigBed broadPeak
Organism
256
Homo sapiens
Biosample type
150
tissue
67
in vitro differentiated cells
40
primary cell
Organ
116
connective tissue
82
pancreas
49
adipose tissue
48
liver
26
epithelium
9
musculature of body
Project
257
AMP
Genome assembly (visualization)
134
hg19
133
GRCh38
Lab
257
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
16
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
257 results
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Clear Filters
ChIP-seq
tissue
liver
48
islet of Langerhans
36
subcutaneous abdominal adipose tissue
35
white adipose tissue
12
skeletal muscle tissue
9
+ See 2 more…
in vitro differentiated cells
adipocyte
67
primary cell
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
skeletal muscle myoblast
2
See all biosamples
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