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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
335
ChIP-seq
Assay category
335
DNA binding
Target of assay
197
transcription factor
71
control
66
recombinant protein
65
histone
65
histone modification
40
broad histone mark
30
RNA binding protein
25
narrow histone mark
11
chromatin remodeller
1
other context
other post-translational modification
Date released
335
November, 2017
257
August, 2017
240
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
67
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
13
November, 2019
12
October, 2017
8
February, 2021
6
September, 2017
3
March, 2020
Available data
390
bam
332
bigWig
322
fastq
311
bed narrowPeak
310
bigBed narrowPeak
78
tagAlign
bed broadPeak
63
bigBed broadPeak
3
tar
Organism
335
Homo sapiens
Biosample type
256
cell line
76
tissue
3
primary cell
Organ
256
liver
79
brain
2
epithelium
2
vasculature
1
blood vessel
Project
335
AMP
Genome assembly (visualization)
224
GRCh38
210
hg19
Lab
335
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
8
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bed broadPeak
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
335 results
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Clear Filters
ChIP-seq
cell line
HepG2
256
tissue
layer of hippocampus
22
caudate nucleus
14
substantia nigra
14
cingulate gyrus
12
middle frontal area 46
12
+ See 1 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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