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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
Assay category
226
Transcription
87
DNA accessibility
43
DNA methylation
27
DNA binding
9
3D chromatin structure
Target of assay
18
control
9
histone
9
histone modification
5
broad histone mark
4
narrow histone mark
Date released
14
August, 2017
7
October, 2019
2
November, 2019
2
October, 2018
1
May, 2019
1
May, 2021
Available data
198
bam
161
bigWig
fastq
bed narrowPeak
59
bigBed narrowPeak
21
bed bed3+
19
tagAlign
12
bed broadPeak
Organism
27
Homo sapiens
Biosample type
17
tissue
9
cell line
1
in vitro differentiated cells
Organ
53
connective tissue
51
liver
42
brain
35
adipose tissue
27
pancreas
25
blood vessel
25
vasculature
20
heart
18
limb
15
epithelium
13
kidney
12
musculature of body
11
nerve
9
artery
7
vein
4
gonad
4
ovary
3
eye
1
lymph node
Project
27
AMP
Lab
27
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bed narrowPeak
fastq
organ_slims!
bone element
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
tissue
islet of Langerhans
14
endocrine pancreas
2
body of pancreas
1
cell line
Panc1
7
EndoC_BH1
2
in vitro differentiated cells
pancreatic PP cell
1
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