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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
Assay category
28
DNA binding
24
Transcription
5
DNA accessibility
3
3D chromatin structure
2
DNA methylation
Target of assay
184
histone
histone modification
114
narrow histone mark
70
broad histone mark
28
control
Date released
15
November, 2017
7
October, 2019
3
May, 2019
3
October, 2017
Available data
30
bam
19
tagAlign
8
fastq
6
bigWig
3
bed broadPeak
3
bed narrowPeak
bigBed broadPeak
3
bigBed narrowPeak
Organism
28
Homo sapiens
Biosample type
25
tissue
3
primary cell
Organ
382
liver
75
connective tissue
67
pancreas
59
blood
59
bodily fluid
41
adipose tissue
37
heart
34
epithelium
29
vasculature
28
blood vessel
28
brain
22
kidney
17
limb
14
artery
14
spleen
11
nerve
10
embryo
6
musculature of body
2
eye
2
vein
Project
28
AMP
Genome assembly (visualization)
3
hg19
Lab
28
AMP-T2D consortium
files.file_type!
bigBed broadPeak
month_released!
May, 2020
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
tissue
brain
3
layer of hippocampus
3
caudate nucleus
2
cerebellum (Hemisphere)
2
cingulate gyrus
2
+ See 10 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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