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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
Assay category
166
Transcription
70
DNA binding
47
DNA accessibility
10
DNA methylation
3
3D chromatin structure
Target of assay
41
histone
41
histone modification
23
broad histone mark
20
control
18
narrow histone mark
9
transcription factor
5
RNA binding protein
Date released
40
May, 2024
11
April, 2019
6
February, 2021
6
May, 2019
5
October, 2019
2
June, 2019
Available data
114
bed narrowPeak
114
bigWig
93
bam
bigBed narrowPeak
6
tagAlign
Organism
70
Homo sapiens
Biosample type
62
tissue
6
cell line
2
primary cell
Organ
200
liver
148
pancreas
124
brain
120
connective tissue
93
epithelium
70
heart
adipose tissue
31
vasculature
30
blood vessel
28
kidney
25
musculature of body
22
embryo
18
limb
13
artery
11
nerve
8
spleen
7
vein
6
blood
6
bodily fluid
4
gonad
4
ovary
3
eye
1
lymph node
1
pituitary gland
Project
70
AMP
Genome assembly (visualization)
49
GRCh38
10
hg19
Lab
40
Patrick T. Ellinor, Broad
30
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bigBed narrowPeak
month_released!
October, 2018
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
70 results
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ChIP-seq
tissue
left cardiac atrium
40
heart
7
heart left ventricle
7
right atrium auricular region
3
coronary artery
2
+ See 2 more…
cell line
smooth muscle cell of the coronary artery
6
primary cell
cardiac fibroblast
2
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