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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ChIP-seq
Assay category
76
DNA binding
40
DNA accessibility
Target of assay
67
histone
67
histone modification
37
narrow histone mark
30
broad histone mark
9
transcription factor
8
RNA binding protein
1
chromatin remodeller
Date released
September, 2018
16
December, 2017
16
October, 2019
14
August, 2017
11
November, 2019
4
June, 2019
4
May, 2019
4
November, 2017
3
August, 2021
3
May, 2021
1
March, 2020
Available data
108
bam
80
bigWig
76
bed narrowPeak
51
fastq
36
bigBed narrowPeak
7
tagAlign
6
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
Organism
76
Homo sapiens
Biosample type
45
primary cell
18
in vitro differentiated cells
13
cell line
Organ
413
liver
170
brain
114
heart
108
pancreas
76
epithelium
75
vasculature
73
blood vessel
58
connective tissue
54
blood
54
bodily fluid
48
limb
39
kidney
27
musculature of body
25
artery
24
nerve
14
embryo
12
spleen
10
vein
7
adipose tissue
2
eye
1
pituitary gland
0
lung
Project
74
AMP
2
T1D
Genome assembly (visualization)
76
GRCh38
76
hg19
Lab
76
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
Audit category:
5
inconsistent control read length
month_released!
September, 2018
BIOSAMPLE
ASSAY
76 results
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Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
10
epithelial cell of proximal tubule
8
pancreatic alpha cell
7
pancreatic beta cell
7
kidney epithelial cell
4
+ See 4 more…
in vitro differentiated cells
hepatocyte
14
Hepatic endoderm
2
pancreatic PP cell
2
cell line
EndoC_BH1
13
See all biosamples
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