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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
172
ChIP-seq
Assay category
172
DNA binding
35
DNA accessibility
12
Transcription
3
3D chromatin structure
Target of assay
166
histone
166
histone modification
106
narrow histone mark
60
broad histone mark
3
RNA binding protein
3
control
3
transcription factor
Date released
75
October, 2019
66
November, 2017
25
May, 2019
6
October, 2017
Available data
196
bam
172
bigWig
170
bed narrowPeak
118
tagAlign
94
bigBed narrowPeak
18
fastq
15
bed broadPeak
6
bigBed broadPeak
1
tagAlign bed3+
Organism
172
Homo sapiens
Biosample type
163
tissue
9
primary cell
Organ
432
liver
172
brain
pancreas
114
heart
98
epithelium
79
vasculature
76
blood vessel
75
connective tissue
54
blood
54
bodily fluid
48
limb
39
kidney
27
musculature of body
25
artery
24
nerve
19
adipose tissue
14
embryo
12
spleen
12
vein
2
eye
1
pituitary gland
Project
172
AMP
Genome assembly (visualization)
168
GRCh38
121
hg19
Lab
172
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
3
missing controlled_by
month_released!
May, 2021
organ_slims!
pancreas
BIOSAMPLE
ASSAY
172 results
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ChIP-seq
tissue
layer of hippocampus
17
angular gyrus
14
temporal lobe
13
caudate nucleus
12
substantia nigra
12
+ See 61 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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