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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 163ChIP-seq
Assay category
  • 215Transcription
  • 163DNA binding
  • 157DNA accessibility
  • 52DNA methylation
  • 13D chromatin structure
Target of assay
  • 109transcription factor
  • 41control
  • 21RNA binding protein
  • 11chromatin remodeller
  • 10histone modification
  • 9histone
  • 6narrow histone mark
  • 3broad histone mark
  • 3other context
  • 3other post-translational modification
Date released
  • 44November, 2017
  • 35October, 2018
  • 32December, 2018
  • 26November, 2018
  • 14August, 2017
  • 8January, 2019
  • 4December, 2017
Available data
  • 163bam
  • 163fastq
  • 122bed narrowPeak
  • 122bigWig
  • 113bigBed narrowPeak
Organism
  • 163Homo sapiens
Biosample type
  • 97cell line
  • 65tissue
  • 1primary cell
Organ
  • 69liver
  • 45blood
  • 45bodily fluid
  • 22adipose tissue
  • 22connective tissue
  • 13pancreas
  • 13spleen
Project
  • 163AMP
Genome assembly (visualization)
  • 122hg19
  • 120GRCh38
Lab
  • 163AMP-T2D consortium
Audit category:
  • 7missing controlled_by
Audit category:
  • 9inconsistent control run_type
  • 8inconsistent control read length
  • 1inconsistent assembly
BIOSAMPLE
ASSAY

163 results

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Clear Filters
ChIP-seq
cell line
HepG252
GM1287845
tissue
body of pancreas13
liver13
spleen13
subcutaneous adipose tissue12
omental fat pad10
primary cell
skeletal muscle myoblast1
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