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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
Assay category
401
Transcription
77
DNA binding
8
DNA accessibility
6
DNA methylation
Target of assay
36
histone
36
histone modification
24
control
20
broad histone mark
17
transcription factor
16
narrow histone mark
5
RNA binding protein
Date released
50
August, 2017
23
October, 2018
4
October, 2019
Available data
37
bam
37
fastq
19
bigWig
8
tagAlign
7
bed narrowPeak
6
bigBed narrowPeak
4
bed bed3+
1
bed broadPeak
Organism
77
Homo sapiens
Biosample type
77
tissue
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
77
AMP
Genome assembly (visualization)
19
hg19
18
GRCh38
Lab
77
AMP-T2D consortium
Audit category:
12
missing controlled_by
lab.title!
Maike Sander, UCSD
BIOSAMPLE
ASSAY
77 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
36
subcutaneous adipose tissue
12
white adipose tissue
12
omental fat pad
11
islet of Langerhans
4
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