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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
107
ChIP-seq
Assay category
666
Transcription
107
DNA binding
32
DNA accessibility
Target of assay
47
histone
47
histone modification
40
control
27
broad histone mark
20
narrow histone mark
20
transcription factor
11
RNA binding protein
Date released
406
November, 2017
296
August, 2017
242
October, 2019
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
34
December, 2018
32
September, 2018
31
June, 2019
25
August, 2021
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
11
May, 2021
8
February, 2021
6
September, 2017
3
March, 2020
Available data
106
bam
66
bed narrowPeak
66
bigWig
58
fastq
45
bigBed narrowPeak
32
tagAlign
3
bed bed3+
Organism
107
Homo sapiens
Biosample type
74
tissue
21
in vitro differentiated cells
8
cell line
4
primary cell
Organ
51
pancreas
23
adipose tissue
23
connective tissue
6
artery
6
blood vessel
6
heart
6
vasculature
4
epithelium
4
liver
Project
107
AMP
Genome assembly (visualization)
66
GRCh38
65
hg19
Lab
107
AMP-T2D consortium
18
Bing Ren, UCSD
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
107 results
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Clear Filters
ChIP-seq
tissue
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
pancreas
2
in vitro differentiated cells
neural progenitor cell
21
cell line
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
primary cell
hepatocyte
4
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