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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
235
ChIP-seq
Assay category
235
DNA binding
40
DNA accessibility
24
Transcription
5
3D chromatin structure
2
DNA methylation
Target of assay
202
histone
202
histone modification
123
narrow histone mark
79
broad histone mark
30
control
3
RNA binding protein
3
transcription factor
Date released
101
October, 2019
91
November, 2017
28
May, 2019
15
October, 2017
Available data
213
bam
184
bigWig
180
bed narrowPeak
118
tagAlign
104
bigBed narrowPeak
18
fastq
17
bed broadPeak
8
bigBed broadPeak
1
tagAlign bed3+
Organism
235
Homo sapiens
Biosample type
209
tissue
26
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
235
AMP
Genome assembly (visualization)
181
GRCh38
135
hg19
Lab
235
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
month_released!
April, 2018
BIOSAMPLE
ASSAY
235 results
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ChIP-seq
tissue
layer of hippocampus
23
brain
20
substantia nigra
16
angular gyrus
15
caudate nucleus
15
+ See 63 more…
primary cell
endothelial cell of umbilical vein
17
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
See all biosamples
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