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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
Assay category
481
Transcription
36
DNA binding
32
DNA accessibility
1
3D chromatin structure
1
DNA methylation
Target of assay
21
control
9
histone
9
histone modification
6
RNA binding protein
6
transcription factor
5
narrow histone mark
4
broad histone mark
Date released
August, 2017
23
October, 2018
12
June, 2019
1
October, 2019
Available data
35
bam
23
fastq
14
bed narrowPeak
14
bigBed narrowPeak
14
bigWig
Organism
36
Homo sapiens
Biosample type
24
tissue
12
primary cell
Organ
481
liver
218
brain
134
heart
124
pancreas
102
epithelium
102
vasculature
99
blood vessel
66
limb
52
kidney
50
blood
50
bodily fluid
36
connective tissue
35
nerve
34
artery
23
adipose tissue
22
embryo
20
spleen
17
musculature of body
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
36
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
36
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
month_released!
August, 2017
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
36 results
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ChIP-seq
tissue
subcutaneous adipose tissue
12
omental fat pad
11
islet of Langerhans
1
primary cell
mesenchymal stem cell
7
cardiac fibroblast
5
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