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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
257
ChIP-seq
Assay category
257
DNA binding
71
DNA accessibility
33
Transcription
9
3D chromatin structure
8
DNA methylation
Target of assay
220
histone
220
histone modification
130
narrow histone mark
90
broad histone mark
34
control
3
RNA binding protein
3
transcription factor
Date released
91
November, 2017
84
October, 2019
35
May, 2019
22
August, 2017
15
October, 2017
10
June, 2019
Available data
213
bam
199
bigWig
197
bed narrowPeak
133
tagAlign
108
bigBed narrowPeak
28
bed broadPeak
18
fastq
6
bigBed broadPeak
1
tagAlign bed3+
Organism
257
Homo sapiens
Biosample type
238
tissue
19
primary cell
Organ
552
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
257
AMP
Genome assembly (visualization)
184
GRCh38
150
hg19
Lab
257
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
Audit category:
4
missing controlled_by
month_released!
January, 2018
BIOSAMPLE
ASSAY
257 results
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ChIP-seq
tissue
layer of hippocampus
23
skeletal muscle tissue
22
brain
20
substantia nigra
16
angular gyrus
15
+ See 65 more…
primary cell
skeletal muscle satellite cell
8
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
skeletal muscle cell
2
See all biosamples
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