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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
144
ChIP-seq
Assay category
144
DNA binding
67
Transcription
65
DNA accessibility
5
3D chromatin structure
2
DNA methylation
Target of assay
71
histone
71
histone modification
47
transcription factor
45
broad histone mark
26
narrow histone mark
24
control
12
RNA binding protein
8
chromatin remodeller
Date released
50
May, 2019
40
October, 2019
27
December, 2018
18
January, 2019
November, 2018
6
February, 2021
3
November, 2017
Available data
144
bam
118
bigWig
115
bed narrowPeak
111
bigBed narrowPeak
48
fastq
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
Organism
144
Homo sapiens
Biosample type
73
tissue
51
cell line
20
primary cell
Organ
503
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
52
kidney
45
blood
45
bodily fluid
39
musculature of body
35
nerve
34
artery
22
embryo
17
vein
14
spleen
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
144
AMP
Genome assembly (visualization)
118
hg19
115
GRCh38
Lab
144
AMP-T2D consortium
Audit category:
1
inconsistent control
month_released!
November, 2018
BIOSAMPLE
ASSAY
144 results
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Clear Filters
ChIP-seq
tissue
tibial artery
23
ascending aorta
16
thoracic aorta
16
aorta
13
coronary artery
5
cell line
GM12878
45
smooth muscle cell of the coronary artery
6
primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
3
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