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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
179
ChIP-seq
Assay category
179
DNA binding
166
Transcription
86
DNA accessibility
10
DNA methylation
3
3D chromatin structure
Target of assay
98
histone
98
histone modification
57
broad histone mark
56
transcription factor
41
narrow histone mark
23
control
19
RNA binding protein
8
chromatin remodeller
Date released
57
April, 2019
40
May, 2024
27
December, 2018
21
May, 2019
18
January, 2019
November, 2018
6
February, 2021
5
June, 2019
5
October, 2019
Available data
156
bed narrowPeak
156
bigWig
138
bam
106
bigBed narrowPeak
45
fastq
6
tagAlign
Organism
179
Homo sapiens
Biosample type
123
tissue
51
cell line
5
primary cell
Organ
503
liver
218
brain
218
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
52
kidney
45
blood
45
bodily fluid
39
musculature of body
35
nerve
34
artery
22
embryo
17
vein
14
spleen
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
179
AMP
Genome assembly (visualization)
155
GRCh38
116
hg19
Lab
139
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
1
inconsistent control
month_released!
November, 2018
BIOSAMPLE
ASSAY
179 results
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Clear Filters
ChIP-seq
tissue
left cardiac atrium
40
heart left ventricle
35
heart
14
heart right ventricle
13
right atrium auricular region
10
+ See 2 more…
cell line
GM12878
45
smooth muscle cell of the coronary artery
6
primary cell
cardiac fibroblast
5
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