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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 296ChIP-seq
Assay category
  • 296DNA binding
  • 89Transcription
  • 15DNA methylation
  • 11DNA accessibility
Target of assay
  • 199histone modification
  • 198histone
  • 109broad histone mark
  • 88narrow histone mark
  • 50control
  • 47transcription factor
  • 8RNA binding protein
  • 3chromatin remodeller
Date released
  • 406November, 2017
  • 296August, 2017
  • 242October, 2019
  • 165May, 2021
  • 120May, 2019
  • 94December, 2017
  • 80April, 2019
  • 74October, 2018
  • 70November, 2018
  • 50May, 2020
  • 43August, 2021
  • 40May, 2024
  • 34December, 2018
  • 32September, 2018
  • 31June, 2019
  • 25January, 2019
  • 24February, 2018
  • 15October, 2017
  • 13November, 2019
  • 8February, 2021
  • 6September, 2017
  • 3March, 2020
Available data
  • 181bam
  • 181fastq
  • 171bigWig
  • 132bed narrowPeak
  • 85tagAlign
  • 39bed broadPeak
  • 33bed bed3+
  • 32bigBed narrowPeak
  • 13bigBed broadPeak
Organism
  • 289Homo sapiens
Biosample type
  • 176tissue
  • 67in vitro differentiated cells
  • 53primary cell
Organ
  • 117connective tissue
  • 94pancreas
  • 50adipose tissue
  • 48liver
  • 26epithelium
  • 22musculature of body
Project
  • 296AMP
Genome assembly (visualization)
  • 173hg19
  • 151GRCh38
Lab
  • 296AMP-T2D consortium
Audit category:
  • 39missing controlled_by
Audit category:
  • 16inconsistent control read length
  • 3inconsistent assembly
  • 1inconsistent control run_type
BIOSAMPLE
ASSAY

296 results

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Clear Filters
ChIP-seq
tissue
liver48
islet of Langerhans42
subcutaneous abdominal adipose tissue36
skeletal muscle tissue22
pancreas14
in vitro differentiated cells
adipocyte67
primary cell
skeletal muscle myoblast15
pancreatic alpha cell13
pancreatic beta cell13
pancreatic endocrine cell12
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