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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
398
ChIP-seq
Assay category
398
DNA binding
Target of assay
242
transcription factor
86
histone
86
histone modification
69
control
66
recombinant protein
50
broad histone mark
36
narrow histone mark
35
RNA binding protein
15
chromatin remodeller
other context
2
other post-translational modification
Date released
398
November, 2017
270
August, 2017
218
October, 2019
161
May, 2021
115
May, 2019
80
April, 2019
75
December, 2017
74
October, 2018
67
November, 2018
50
May, 2020
40
May, 2024
39
August, 2021
34
December, 2018
25
January, 2019
25
June, 2019
24
February, 2018
15
October, 2017
11
September, 2018
8
February, 2021
6
September, 2017
2
March, 2020
Available data
384
bam
326
bigWig
316
fastq
307
bed narrowPeak
306
bigBed narrowPeak
78
tagAlign
65
bed broadPeak
59
bigBed broadPeak
3
tar
Organism
398
Homo sapiens
Biosample type
313
cell line
82
tissue
3
primary cell
Organ
313
liver
91
brain
epithelium
6
vasculature
3
blood vessel
Project
398
AMP
Genome assembly (visualization)
274
GRCh38
273
hg19
Lab
398
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
epithelium
target.investigated_as!
other context
BIOSAMPLE
ASSAY
398 results
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Clear Filters
ChIP-seq
cell line
HepG2
313
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
3
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