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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
366
ChIP-seq
Assay category
366
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
50
broad histone mark
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
other context
2
other post-translational modification
Date released
366
November, 2017
208
August, 2017
101
May, 2021
101
October, 2019
86
May, 2019
78
December, 2017
67
November, 2018
63
October, 2018
57
April, 2019
34
December, 2018
32
August, 2021
25
May, 2024
23
May, 2020
22
January, 2019
20
June, 2019
17
September, 2018
16
February, 2018
13
October, 2017
9
November, 2019
8
February, 2021
6
September, 2017
Available data
361
bam
312
fastq
302
bigWig
282
bed narrowPeak
282
bigBed narrowPeak
56
bed broadPeak
54
bigBed broadPeak
52
tagAlign
3
tar
Organism
366
Homo sapiens
Biosample type
306
cell line
54
tissue
6
primary cell
Organ
306
liver
60
brain
4
epithelium
4
vasculature
2
blood vessel
Project
366
AMP
Genome assembly (visualization)
265
hg19
250
GRCh38
Lab
366
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
16
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
narrow histone mark
other context
BIOSAMPLE
ASSAY
366 results
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Clear Filters
ChIP-seq
cell line
HepG2
306
tissue
layer of hippocampus
15
caudate nucleus
10
substantia nigra
10
cingulate gyrus
9
middle frontal area 46
9
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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