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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 218ChIP-seq
Assay category
  • 218DNA binding
  • 37DNA accessibility
  • 24Transcription
  • 33D chromatin structure
  • 2DNA methylation
Target of assay
  • 187histone
  • 187histone modification
  • 117narrow histone mark
  • 70broad histone mark
  • 28control
  • 3RNA binding protein
  • 3transcription factor
Date released
  • 91November, 2017
  • 84October, 2019
  • 28May, 2019
  • 15October, 2017
Available data
  • 196bam
  • 172bigWig
  • 170bed narrowPeak
  • 118tagAlign
  • 94bigBed narrowPeak
  • 18fastq
  • 15bed broadPeak
  • 6bigBed broadPeak
  • 1tagAlign bed3+
Organism
  • 218Homo sapiens
Biosample type
  • 209tissue
  • 9primary cell
Organ
  • 552liver
  • 218brain
  • 218pancreas
  • 153connective tissue
  • 134heart
  • 129epithelium
  • 102vasculature
  • 99blood vessel
  • 73adipose tissue
  • 66limb
  • 60blood
  • 60bodily fluid
  • 52kidney
  • 39musculature of body
  • 35nerve
  • 34artery
  • 22embryo
  • 20spleen
  • 17vein
  • 5eye
  • 4gonad
  • 4ovary
  • 1lymph node
  • 1pituitary gland
Project
  • 218AMP
Genome assembly (visualization)
  • 171GRCh38
  • 123hg19
Lab
  • 218AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
Audit category:
  • 4missing controlled_by
BIOSAMPLE
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218 results

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Clear Filters
ChIP-seq
tissue
layer of hippocampus23
brain20
substantia nigra16
angular gyrus15
caudate nucleus15
primary cell
astrocyte of the cerebellum3
brain microvascular endothelial cell3
choroid plexus epithelial cell3
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