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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
WGBS
17
RRBS
1
DNAme array
Assay category
1582
Transcription
1260
DNA binding
747
DNA accessibility
88
DNA methylation
3D chromatin structure
Date released
41
May, 2022
23
July, 2019
11
August, 2017
6
February, 2021
6
November, 2018
1
May, 2021
Available data
41
zippedFastqFolder
31
bed bedMethyl
31
bigBed bedMethyl
18
fastq
17
bam
16
bigWig
6
tsv
Organism
88
Homo sapiens
Biosample type
55
primary cell
33
tissue
Organ
53
pancreas
52
epithelium
9
heart
liver
6
adipose tissue
6
connective tissue
6
musculature of body
3
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
47
HPAP
41
AMP
Genome assembly (visualization)
16
GRCh38
15
hg19
Lab
47
Klaus Kaestner, Upenn
41
AMP-T2D consortium
Audit category:
inconsistent ontology term
assay_slims!
3D chromatin structure
audit.ERROR.category!
inconsistent ontology term
month_released!
May, 2023
organ_slims!
liver
BIOSAMPLE
ASSAY
88 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac muscle cell
1
choroid plexus epithelial cell
1
kidney epithelial cell
1
+ See 5 more…
tissue
heart left ventricle
4
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
subcutaneous abdominal adipose tissue
3
+ See 11 more…
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