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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
RRBS
17
WGBS
1
DNAme array
Assay category
605
DNA binding
457
Transcription
DNA accessibility
39
DNA methylation
31
3D chromatin structure
1
DNA sequencing
Date released
May, 2022
19
July, 2019
13
August, 2017
6
February, 2021
1
May, 2021
Available data
19
bed bedMethyl
19
bigBed bedMethyl
12
fastq
6
tsv
1
bam
Organism
39
Homo sapiens
Biosample type
22
tissue
17
primary cell
Organ
12
epithelium
8
pancreas
6
liver
5
connective tissue
5
musculature of body
4
adipose tissue
4
heart
4
kidney
2
brain
2
vasculature
1
blood vessel
1
eye
1
pericardium
Project
33
AMP
6
HPAP
Genome assembly (visualization)
19
hg19
GRCh38
Lab
33
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
assembly!
GRCh38
files.file_type!
bedpe
month_released!
May, 2022
BIOSAMPLE
ASSAY
39 results
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RRBS
WGBS
DNAme array
tissue
liver
1
3
skeletal muscle tissue
4
heart left ventricle
1
2
subcutaneous abdominal adipose tissue
3
adipose tissue
1
+ See 7 more…
primary cell
pancreatic alpha cell
6
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 7 more…
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