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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
WGBS
19
RRBS
1
DNAme array
Assay category
1685
Transcription
1319
DNA binding
DNA accessibility
49
DNA methylation
29
3D chromatin structure
Date released
May, 2022
25
July, 2019
11
August, 2017
6
February, 2021
6
November, 2018
1
May, 2021
Available data
33
bed bedMethyl
33
bigBed bedMethyl
18
fastq
17
bam
16
bigWig
6
tsv
Organism
49
Homo sapiens
Biosample type
33
tissue
16
primary cell
Organ
12
epithelium
12
pancreas
10
heart
7
connective tissue
liver
6
adipose tissue
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
43
AMP
6
HPAP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
43
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
assay_slims!
DNA accessibility
files.file_type!
bedpe
month_released!
May, 2022
organ_slims!
liver
BIOSAMPLE
ASSAY
49 results
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WGBS
RRBS
DNAme array
tissue
heart left ventricle
4
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
subcutaneous abdominal adipose tissue
3
+ See 11 more…
primary cell
pancreatic alpha cell
6
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
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