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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
single cell RNA-seq
21
total RNA-seq
Assay category
64
Transcription
3
DNA accessibility
0
DNA methylation
Date released
569
February, 2021
190
May, 2020
183
May, 2021
170
August, 2021
168
July, 2018
104
August, 2017
101
May, 2022
94
February, 2023
92
July, 2019
56
September, 2020
49
April, 2018
47
September, 2023
30
October, 2019
27
September, 2018
25
February, 2020
20
November, 2019
15
February, 2018
15
March, 2020
9
April, 2020
8
December, 2019
8
November, 2018
5
January, 2019
4
March, 2023
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
38
fastq
19
zippedFastqFolder
7
tsv
5
bam
5
bigWig
Organism
64
Homo sapiens
Biosample type
61
primary cell
2
in vitro differentiated cells
1
tissue
Organ
21
epithelium
16
pancreas
5
liver
1
kidney
Project
56
HPAP
8
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
56
Klaus Kaestner, Upenn
8
AMP-T2D consortium
Audit category:
2
audit script error
2
inconsistent ontology term
lab.title!
Bing Ren, UCSD
BIOSAMPLE
ASSAY
64 results
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single cell RNA-seq
total RNA-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
hepatocyte
5
pancreatic beta cell
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
tissue
kidney
1
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