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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
WGBS
17
RRBS
1
DNAme array
Assay category
1510
DNA binding
1271
Transcription
576
DNA accessibility
40
DNA methylation
16
3D chromatin structure
1
DNA sequencing
Date released
21
July, 2019
15
August, 2017
3
November, 2018
1
May, 2021
Available data
27
bed bedMethyl
27
bigBed bedMethyl
12
bam
12
bigWig
11
fastq
Organism
40
Homo sapiens
Biosample type
30
tissue
9
primary cell
1
cell line
Organ
pancreas
52
epithelium
9
heart
7
liver
6
adipose tissue
6
connective tissue
6
musculature of body
3
kidney
3
vasculature
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
40
AMP
Genome assembly (visualization)
15
hg19
12
GRCh38
Lab
40
AMP-T2D consortium
Audit category:
inconsistent ontology term
assay_title!
CRISPR genome editing followed by DNA sequencing
audit.ERROR.category!
inconsistent ontology term
organ_slims!
blood vessel
pancreas
BIOSAMPLE
ASSAY
40 results
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WGBS
RRBS
DNAme array
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
subcutaneous abdominal adipose tissue
3
+ See 9 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
monocyte
1
+ See 4 more…
cell line
HepG2
1
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