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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
WGBS
3
RRBS
Assay category
705
DNA binding
674
Transcription
62
DNA accessibility
14
DNA methylation
5
3D chromatin structure
1
DNA sequencing
Date released
10
August, 2017
3
July, 2019
1
November, 2018
Available data
6
bed bedMethyl
6
bigBed bedMethyl
6
fastq
3
bam
3
bigWig
Organism
14
Homo sapiens
Biosample type
11
tissue
2
primary cell
1
cell line
Organ
53
epithelium
53
pancreas
10
heart
7
connective tissue
7
liver
6
adipose tissue
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
14
AMP
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
14
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
CRISPR genome editing followed by DNA sequencing
lab.title!
Anna Gloyn, Oxford
BIOSAMPLE
ASSAY
14 results
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WGBS
RRBS
tissue
liver
3
1
adipose tissue
3
subcutaneous abdominal adipose tissue
3
right lobe of liver
1
primary cell
cardiac fibroblast
1
hepatocyte
1
cell line
HepG2
1
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