Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
WGBS
16
RRBS
1
DNAme array
Assay category
1794
Transcription
1348
DNA binding
765
DNA accessibility
90
DNA methylation
24
3D chromatin structure
Date released
41
May, 2022
25
July, 2019
11
August, 2017
6
February, 2021
6
November, 2018
1
May, 2021
Available data
41
zippedFastqFolder
31
bed bedMethyl
31
bigBed bedMethyl
18
fastq
16
bam
15
bigWig
6
tsv
Organism
90
Homo sapiens
Biosample type
57
primary cell
33
tissue
cell line
Organ
53
epithelium
53
pancreas
10
heart
7
connective tissue
6
adipose tissue
6
liver
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
47
HPAP
43
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
47
Klaus Kaestner, Upenn
43
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
CRISPR genome editing followed by sgRNA sequencing
biosample_type!
cell line
lab.title!
Maike Sander, UCSD
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
90 results
search-icon
table-tab-icon
Clear Filters
WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 7 more…
tissue
heart left ventricle
4
1
liver
3
1
adipose tissue
3
pancreas
2
1
subcutaneous abdominal adipose tissue
3
+ See 11 more…
See all biosamples
Download