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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
WGBS
15
RRBS
1
DNAme array
Assay category
1829
Transcription
1575
DNA binding
819
DNA accessibility
82
DNA methylation
34
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
27
July, 2019
August, 2017
7
November, 2018
6
February, 2021
1
May, 2021
Available data
41
zippedFastqFolder
30
bed bedMethyl
30
bigBed bedMethyl
16
bam
15
bigWig
13
fastq
6
tsv
Organism
82
Homo sapiens
Biosample type
57
primary cell
24
tissue
1
cell line
Organ
53
epithelium
53
pancreas
10
heart
4
kidney
3
liver
3
vasculature
2
blood vessel
2
brain
2
musculature of body
2
spleen
1
connective tissue
1
eye
1
limb
1
pericardium
Project
47
HPAP
35
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
47
Klaus Kaestner, Upenn
35
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
Capture-C
lab.title!
Mark McCarthy, Oxford
month_released!
August, 2017
organ_slims!
large intestine
BIOSAMPLE
ASSAY
82 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 7 more…
tissue
heart left ventricle
4
1
pancreas
2
1
aorta
2
body of pancreas
2
heart right ventricle
2
+ See 9 more…
cell line
HepG2
1
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