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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
WGBS
21
RRBS
DNAme array
Assay category
1870
DNA binding
1869
Transcription
831
DNA accessibility
96
DNA methylation
34
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
27
July, 2019
15
August, 2017
7
November, 2018
6
February, 2021
Available data
41
zippedFastqFolder
36
bed bedMethyl
36
bigBed bedMethyl
21
fastq
18
bam
17
bigWig
6
tsv
Organism
96
Homo sapiens
Biosample type
57
primary cell
38
tissue
1
cell line
Organ
53
epithelium
53
pancreas
10
heart
7
connective tissue
7
liver
6
adipose tissue
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
49
AMP
47
HPAP
Genome assembly (visualization)
19
hg19
17
GRCh38
Lab
49
AMP-T2D consortium
47
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
assay_title!
DNAme array
files.file_type!
tagAlign bed3+
lab.title!
Maike Sander, UCSD
month_released!
April, 2018
BIOSAMPLE
ASSAY
96 results
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WGBS
RRBS
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 7 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
+ See 13 more…
cell line
HepG2
1
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