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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
WGBS
17
RRBS
1
DNAme array
Assay category
1607
DNA binding
1437
Transcription
479
DNA accessibility
46
DNA methylation
26
3D chromatin structure
Date released
23
July, 2019
15
August, 2017
7
November, 2018
1
May, 2021
Available data
32
bed bedMethyl
32
bigBed bedMethyl
18
bam
17
bigWig
15
fastq
Organism
46
Homo sapiens
Biosample type
37
tissue
8
primary cell
1
cell line
Organ
10
heart
7
connective tissue
7
liver
6
adipose tissue
6
epithelium
6
musculature of body
6
pancreas
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
46
AMP
Genome assembly (visualization)
17
GRCh38
15
hg19
Lab
47
Klaus Kaestner, Upenn
46
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
small RNA-seq
files.file_type!
txt
organ_slims!
kidney
BIOSAMPLE
ASSAY
46 results
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WGBS
RRBS
DNAme array
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
+ See 12 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
monocyte
1
+ See 3 more…
cell line
HepG2
1
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