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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 58WGBS
  • 21RRBS
  • 1DNAme array
Assay category
  • 605DNA binding
  • 517Transcription
  • 391DNA accessibility
  • 80DNA methylation
  • 323D chromatin structure
  • 1DNA sequencing
Date released
  • 41May, 2022
  • 19July, 2019
  • 13August, 2017
  • 6February, 2021
  • 1May, 2021
Available data
  • 41zippedFastqFolder
  • 19bed bedMethyl
  • 19bigBed bedMethyl
  • 12fastq
  • 6tsv
  • 1bam
Organism
  • 80Homo sapiens
Biosample type
  • 58primary cell
  • 22tissue
Organ
  • 53epithelium
  • 49pancreas
  • 6liver
  • 5connective tissue
  • 5musculature of body
  • 4adipose tissue
  • 4heart
  • 4kidney
  • 2brain
  • 2vasculature
  • 1blood vessel
  • 1eye
  • 1pericardium
Project
  • 47HPAP
  • 33AMP
Genome assembly (visualization)
  • 19hg19
  • GRCh38
Lab
  • 47Klaus Kaestner, Upenn
  • 33AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
assembly!
  • GRCh38
BIOSAMPLE
ASSAY

80 results

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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell31
pancreatic beta cell16
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
tissue
liver31
skeletal muscle tissue4
heart left ventricle21
subcutaneous abdominal adipose tissue3
adipose tissue1
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