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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
WGBS
15
RRBS
1
DNAme array
Assay category
959
DNA binding
677
DNA accessibility
238
Transcription
74
DNA methylation
28
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
25
July, 2019
7
August, 2017
1
May, 2021
Available data
41
zippedFastqFolder
34
bed bedMethyl
34
bigBed bedMethyl
fastq
18
bam
17
bigWig
tsv
Organism
74
Homo sapiens
Biosample type
49
primary cell
25
tissue
Organ
46
epithelium
43
pancreas
9
heart
4
liver
4
musculature of body
3
adipose tissue
3
connective tissue
3
kidney
3
vasculature
2
blood vessel
2
brain
1
eye
1
limb
1
pericardium
Project
41
HPAP
33
AMP
Genome assembly (visualization)
13
hg19
8
GRCh38
Lab
41
Klaus Kaestner, Upenn
33
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
files.file_type!
fastq
tsv
BIOSAMPLE
ASSAY
74 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
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tissue
heart left ventricle
4
1
subcutaneous abdominal adipose tissue
3
aorta
2
heart right ventricle
2
liver
2
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