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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
WGBS
21
RRBS
1
DNAme array
Assay category
1387
DNA binding
787
DNA accessibility
372
Transcription
90
DNA methylation
9
3D chromatin structure
Date released
41
May, 2022
27
July, 2019
15
August, 2017
6
November, 2018
1
May, 2021
Available data
41
zippedFastqFolder
35
bed bedMethyl
35
bigBed bedMethyl
20
fastq
17
bam
16
bigWig
tsv
Organism
90
Homo sapiens
Biosample type
52
primary cell
38
tissue
cell line
Organ
47
epithelium
47
pancreas
10
heart
7
connective tissue
6
adipose tissue
6
liver
6
musculature of body
4
kidney
3
vasculature
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
49
AMP
41
HPAP
Genome assembly (visualization)
19
hg19
16
GRCh38
Lab
49
AMP-T2D consortium
41
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
biosample_type!
cell line
files.file_type!
hic
tsv
organ_slims!
skin of body
BIOSAMPLE
ASSAY
90 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 8 more…
tissue
heart left ventricle
4
1
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
pancreas
2
1
+ See 13 more…
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