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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
WGBS
14
RRBS
1
DNAme array
Assay category
1770
Transcription
1130
DNA binding
729
DNA accessibility
88
DNA methylation
21
3D chromatin structure
Date released
41
May, 2022
23
July, 2019
11
August, 2017
6
February, 2021
6
November, 2018
1
May, 2021
Available data
41
zippedFastqFolder
29
bed bedMethyl
29
bigBed bedMethyl
18
fastq
16
bam
15
bigWig
6
tsv
Organism
88
Homo sapiens
Biosample type
56
primary cell
32
tissue
cell line
Organ
53
epithelium
53
pancreas
10
heart
7
connective tissue
6
adipose tissue
6
liver
musculature of body
4
kidney
3
vasculature
2
blood vessel
brain
2
spleen
1
eye
1
limb
1
pericardium
Project
47
HPAP
41
AMP
Genome assembly (visualization)
15
GRCh38
14
hg19
Lab
47
Klaus Kaestner, Upenn
41
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
cell line
organ_slims!
brain
musculature of body
BIOSAMPLE
ASSAY
88 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
tissue
heart left ventricle
4
1
liver
3
1
adipose tissue
3
pancreas
2
1
subcutaneous abdominal adipose tissue
3
+ See 10 more…
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