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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 74WGBS
  • 21RRBS
  • 1DNAme array
Assay category
  • 1803Transcription
  • 1387DNA binding
  • 801DNA accessibility
  • 96DNA methylation
  • 303D chromatin structure
Date released
  • 41May, 2022
  • 27July, 2019
  • 15August, 2017
  • 6February, 2021
  • 6November, 2018
  • 1May, 2021
Available data
  • 41zippedFastqFolder
  • 35bed bedMethyl
  • 35bigBed bedMethyl
  • 20fastq
  • 17bam
  • 16bigWig
  • 6tsv
Organism
  • 96Homo sapiens
Biosample type
  • 58primary cell
  • 38tissue
  • cell line
Organ
  • 53epithelium
  • 53pancreas
  • 10heart
  • 7connective tissue
  • 6adipose tissue
  • 6liver
  • 6musculature of body
  • 4kidney
  • 3vasculature
  • 2blood vessel
  • 2brain
  • 2spleen
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 49AMP
  • 47HPAP
Genome assembly (visualization)
  • 19hg19
  • 16GRCh38
Lab
  • 49AMP-T2D consortium
  • 47Klaus Kaestner, Upenn
Audit category:
  • 2inconsistent ontology term
biosample_type!
  • cell line
BIOSAMPLE
ASSAY

96 results

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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell31
pancreatic beta cell16
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
tissue
heart left ventricle41
liver31
skeletal muscle tissue4
adipose tissue3
pancreas21
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