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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
WGBS
16
RRBS
1
DNAme array
Assay category
420
DNA accessibility
375
Transcription
269
DNA binding
64
DNA methylation
28
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
18
July, 2019
4
August, 2017
1
May, 2021
Available data
41
zippedFastqFolder
33
bed bedMethyl
33
bigBed bedMethyl
fastq
16
bam
bigWig
6
tsv
Organism
64
Homo sapiens
Biosample type
50
primary cell
14
tissue
Organ
47
epithelium
43
pancreas
connective tissue
4
heart
4
kidney
4
liver
3
adipose tissue
3
musculature of body
2
brain
2
vasculature
1
blood vessel
1
eye
1
pericardium
Project
41
HPAP
23
AMP
Genome assembly (visualization)
14
hg19
Lab
41
Klaus Kaestner, Upenn
23
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bigBed narrowPeak
bigWig
fastq
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
64 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
tissue
heart left ventricle
2
1
liver
2
skeletal muscle tissue
2
aorta
1
brain
1
+ See 5 more…
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